Joshua Adelman
I am a computational biophysicist and postdoctoral fellow at the University of Pittsburgh. My research involves trying to understand how membrane proteins facilitate the movement of small molecules...
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Assessment Questions: Numpy Arrays
Novice from Competent Given the 2D array generated using the following code snippet: ———————————- import numpy as np x = np.random.normal(size=(10,10)) y = x[2:5,1:5] ———————————- What is the shape of...
View ArticleScreencast: Working efficiently with numpy arrays
I intend to cover the basics of working with numpy arrays efficiently in terms of using ufuncs and similar functionality. The idea will be to introduce students to the concept of ‘vectorized’...
View ArticleVisualizing spatial data using python
Sharon Benjamin and I are planning on giving a short introduction to loading and visualizing basic spatial data using python. The presentation will be based on introductory material we are developing...
View ArticleMotivation: Collaborative writing using version control
While we usually advocate the use of version control in the context of best software development practices, it is a powerful tool whose utility has transformed the way that I write papers. As a...
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